biofam3c                Three-channel biofam data
bootstrap_coefs         Bootstrap Sampling of NHMM Coefficients
build_hmm               Build a Hidden Markov Model
build_lcm               Build a Latent Class Model
build_mhmm              Build a Mixture Hidden Markov Model
build_mm                Build a Markov Model
build_mmm               Build a Mixture Markov Model
cluster_names           Get Cluster Names from Mixture HMMs
cluster_names<-         Set Cluster Names for Mixture Models
coef.nhmm               Get the Estimated Regression Coefficients of
                        Non-Homogeneous Hidden Markov Models
colorpalette            Color palettes
data_to_stslist         Transform TraMineR's state sequence object to
                        data.table and vice versa
estimate_mnhmm          Estimate a Mixture Non-homogeneous Hidden
                        Markov Model
estimate_nhmm           Estimate a Non-homogeneous Hidden Markov Model
fanhmm_leaves           A feedback-augmented non-homogeneuous hidden
                        Markov Model for leaves data
fit_model               Estimate Parameters of (Mixture) Hidden Markov
                        Models and Their Restricted Variants
forward_backward        Forward and Backward Probabilities for Hidden
                        Markov Model
get_cluster_probs       Extract the Prior Cluster Probabilities of MHMM
                        or MNHMM
get_emission_probs      Extract the Emission Probabilities of Hidden
                        Markov Model
get_initial_probs       Extract the Initial State Probabilities of
                        Hidden Markov Model
get_marginals           Compute the Marginal Probabilities from NHMMs
get_transition_probs    Extract the State Transition Probabilities of
                        Hidden Markov Model
gridplot                Plot Multidimensional Sequence Plots in a Grid
hidden_paths            Most Probable Paths of Hidden States
hmm_biofam              Hidden Markov model for the biofam data
hmm_mvad                Hidden Markov model for the mvad data
leaves                  Synthetic data on fathers' parental leaves in
                        Finland
logLik.hmm              Log-likelihood of a Hidden Markov Model
logLik.nhmm             Log-likelihood of a Non-homogeneous Hidden
                        Markov Model
mc_to_sc                Transform a Multichannel Hidden Markov Model
                        into a Single Channel Representation
mc_to_sc_data           Merge Multiple Sequence Objects into One (from
                        Multichannel to Single Channel Data)
mhmm_biofam             Mixture hidden Markov model for the biofam data
mhmm_mvad               Mixture hidden Markov model for the mvad data
most_probable_cluster   Extract Most Probable Cluster for Each Sequence
mssplot                 Interactive Stacked Plots of Multichannel
                        Sequences and/or Most Probable Paths for
                        Mixture Hidden Markov Models
nobs.hmm                Number of Observations in Hidden Markov Model
plot.hmm                Plot hidden Markov models
plot.mhmm               Interactive Plotting for Mixed Hidden Markov
                        Model (mhmm)
plot.ssp                Stack Multichannel Sequence Plots and/or Most
                        Probable Paths Plots from Hidden Markov Models
plot_colors             Plot Colorpalettes
posterior_cluster_probabilities
                        Extract Posterior Cluster Probabilities
posterior_probs         Posterior Probabilities for Hidden Markov
                        Models
predict.nhmm            Predictions from Non-homogeneous Hidden Markov
                        Models
print.hmm               Print Method for a Hidden Markov Model
return_msg              Convert return code from estimate_nhmm and
                        estimate_mnhmm to text
separate_mhmm           Reorganize a mixture hidden Markov model to a
                        list of separate hidden Markov models
                        (covariates ignored)
seqHMM-deprecated       Deprecated function(s) in the seqHMM package
seqHMM-package          The seqHMM package
simulate_hmm            Simulate hidden Markov models
simulate_initial_probs
                        Simulate Parameters of Hidden Markov Models
simulate_mhmm           Simulate Mixture Hidden Markov Models
simulate_mnhmm          Simulate Mixture Non-homogeneous Hidden Markov
                        Models
simulate_nhmm           Simulate Non-homogeneous Hidden Markov Models
sort_sequences          Sort sequences in a sequence object
ssp                     Define Arguments for Plotting Multichannel
                        Sequences and/or Most Probable Paths from
                        Hidden Markov Models
ssplot                  Stacked Plots of Multichannel Sequences and/or
                        Most Probable Paths from Hidden Markov Models
stacked_sequence_plot   Stacked Sequence Plots of Multichannel
                        Sequences and/or Most Probable Paths from
                        Hidden Markov Models
state_names             Get State Names of Hidden Markov Model
summary.mhmm            Summary method for mixture hidden Markov models
summary.mnhmm           Summary method for mixture non-homogenous
                        hidden Markov models
trim_model              Trim Small Probabilities of Hidden Markov Model
update.nhmm             Update Covariate Values of NHMM
vcov.mhmm               Variance-Covariance Matrix for Coefficients of
                        Covariates of Mixture Hidden Markov Model
