R(>= 3.1.0), doParallel, ggplot2, foreach
graphics, stats, cluster, doParallel, ggplot2, pracma, proxy,
methods
dplyr, reshape2, kableExtra, gridExtra,
BSgenome.Hsapiens.UCSC.hg19, knitr, rmarkdown, BSgenome,
GenomicRanges, IRanges, GenomeInfoDb