ape, argparse, caTools, data.table, dendextend, dplyr,
GenomicRanges, ggplot2, ggraph, ggtree, glue, igraph, IRanges,
logger, magrittr, methods, parallel, parallelDist, patchwork,
pryr, purrr, Rcpp, RcppParallel, RhpcBLASctl, R.utils,
reshape2, scales, stats4, stringr, tibble, tidygraph, tidyr,
tidyverse, vcfR, zoo
ape, caTools, data.table, dendextend, dplyr, GenomicRanges,
ggplot2, ggraph, ggtree, glue, igraph, IRanges, logger,
magrittr, methods, optparse, parallel, parallelDist, patchwork,
pryr, purrr, Rcpp, RhpcBLASctl, R.utils, scales, scistreer (>=
1.0.1), stats4, stringr, tibble, tidygraph, tidyr, tidyverse,
vcfR, zoo
ape, caTools, data.table, dendextend, dplyr, GenomicRanges,
ggplot2, ggraph, ggtree, glue, igraph, IRanges, logger,
magrittr, methods, optparse, parallel, parallelDist, patchwork,
pryr, purrr, Rcpp, RhpcBLASctl, R.utils, scales, scistreer (>=
1.1.0), stats4, stringr, tibble, tidygraph, tidyr, vcfR, zoo
ape, caTools, data.table, dendextend, dplyr, GenomicRanges,
ggplot2, ggraph, ggtree, glue, hahmmr, igraph, IRanges, logger,
magrittr, methods, optparse, parallel, parallelDist, patchwork,
pryr, purrr, Rcpp, RhpcBLASctl, R.utils, scales, scistreer (>=
1.1.0), stats4, stringr, tibble, tidygraph, tidyr, vcfR, zoo
ape, caTools, data.table, dendextend, dplyr (>= 1.1.1),
GenomicRanges, ggplot2, ggraph, ggtree, glue, hahmmr, igraph,
IRanges, logger, magrittr, methods, optparse, parallel,
parallelDist, patchwork, pryr, purrr, Rcpp, RhpcBLASctl,
R.utils, scales, scistreer (>= 1.1.0), stats4, stringr, tibble,
tidygraph, tidyr (>= 1.3.0), vcfR, zoo
ggrastr, ggrepel, knitr, matrixStats, testthat (>= 3.0.0),